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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17399260_17399458_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17399260 - 17399458

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

AAGCACTTATTT

Flanking Amino Acid:

RFCLICNYISRIIEPLTSRC

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

36.6

Major BPS

80.4

0.76

80.3

31.8

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

38.1

-1.3

3.1

48.2

47.9

Minor BPS

48.2

-0

1.7

62.31

41.5

Associated Gene:

Gene:

RFC4

Ensembl Gene ID:

ENSAPLG00000007380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007713

17395238 - 17406369

11132