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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17401949_17405808_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17401949 - 17405808

Intron Length:

3860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTGCG

5'SS Class:

major

3'SS Sequence:

CTTGCTGTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

VLKKSLEGADLPNLLFYGPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.9

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.9

0.63

0.9

68.8

Minor 5ss

-2.3

3.1

37.2

40.3

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

RFC4

Ensembl Gene ID:

ENSAPLG00000007380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007713

17395238 - 17406369

11132