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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17470012_17473301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17470012 - 17473301

Intron Length:

3290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTTTT

5'SS Class:

major

3'SS Sequence:

CCTGCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

CAGTCTGTGACT

Flanking Amino Acid:

GHSQWIHHRTAIENFAMTVK

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.3

75.2

37.4

Major BPS

75.1

0.62

65.6

Major PPT

80.9

0.7

0.8

72.1

37.9

Minor 5ss

42.6

-0.8

62.8

Minor BPS

49.6

0.05

2.1

67.06

44.4

Associated Gene:

Gene:

MCF2L2

Ensembl Gene ID:

ENSAPLG00000007943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008288

17455853 - 17547340

91488