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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17531767_17533109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17531767 - 17533109

Intron Length:

1343

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCACGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATTAT

U12 Branch Point Sequence:

TGTTCCATTATT

Flanking Amino Acid:

NLPEIYEFHNRIFLKEIENC

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

42.5

Major BPS

59.8

0.24

1.2

51.6

42.3

Major PPT

92.1

0.95

0.6

88.1

21.8

Minor 5ss

20.6

-3.4

3.9

30.6

43.3

Minor BPS

60.7

0.42

1.9

82.14

38.9

Associated Gene:

Gene:

MCF2L2

Ensembl Gene ID:

ENSAPLG00000007943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008288

17455853 - 17547340

91488