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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17541749_17545874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17541749 - 17545874

Intron Length:

4126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTATTT

5'SS Class:

major

3'SS Sequence:

CCTTGCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

TTGAACATAATG

Flanking Amino Acid:

MHQIAITGYEGDVSELGKLL

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

76.1

33.6

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

64.9

0.34

38.5

Minor 5ss

50.2

0.01

2.8

73.9

42.5

Minor BPS

48.7

-0.2

1.9

58.28

43.2

Associated Gene:

Gene:

MCF2L2

Ensembl Gene ID:

ENSAPLG00000007943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008288

17455853 - 17547340

91488