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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17579040_17582037_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17579040 - 17582037

Intron Length:

2998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

ATAATGATACTT

Flanking Amino Acid:

GGFINFVFVKKAPIYYASAI

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

76.8

0.67

40.9

Major PPT

86.9

0.83

0.7

84.6

29.4

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

38.6

-0.7

2.2

56.24

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040907

17573308 - 17589150

15843

ENSAPLT00000039830

17573308 - 17585236

11929