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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17595550_17596542_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17595550 - 17596542

Intron Length:

993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

TATTCTGTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATTTTAATT

Flanking Amino Acid:

SSAIRDMGIKSTSKAIMSAA

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.5

0.37

1.1

66.9

38.1

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

71.7

0.76

1.1

82.37

32.8

Associated Gene:

Gene:

MCCC1

Ensembl Gene ID:

ENSAPLG00000008989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009393

17593142 - 17609782

16641