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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17600025_17601692_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17600025 - 17601692

Intron Length:

1668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

AAACACTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CCTGCATTAAAC

Flanking Amino Acid:

GTDLVEWQLRVAAGEKIPLK

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

32.7

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

68.2

0.41

62.8

42.8

Minor 5ss

33.9

-1.8

3.3

40.8

45.4

Minor BPS

50.4

-0

1.9

60.42

44.6

Associated Gene:

Gene:

MCCC1

Ensembl Gene ID:

ENSAPLG00000008989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009393

17593142 - 17609782

16641