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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17603729_17604308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17603729 - 17604308

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

CTTTATTGAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

RKLSLLDGENIVDVAVSYGK

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.1

31.1

Major BPS

70.4

0.51

67.1

39.4

Major PPT

72.7

0.51

69.3

40.4

Minor 5ss

33.9

-1.8

3.2

41.6

40.4

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

MCCC1

Ensembl Gene ID:

ENSAPLG00000008989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009393

17593142 - 17609782

16641