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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17604359_17606109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17604359 - 17606109

Intron Length:

1751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

GTTTATCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGTCCTTAAAA

Flanking Amino Acid:

YGKEGSYTMQIEDKMFVVSG

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

38.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

84.7

0.78

0.8

81.5

35.9

Minor 5ss

35.4

-1.7

3.3

45.9

49.3

Minor BPS

81.2

0.98

1.3

84.87

34.7

Associated Gene:

Gene:

MCCC1

Ensembl Gene ID:

ENSAPLG00000008989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009393

17593142 - 17609782

16641