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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17608139_17609650_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17608139 - 17609650

Intron Length:

1512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCATGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TCACTATTGATC

Flanking Amino Acid:

LMVMIAMKMEHTIRAPKAGV

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.8

0.67

0.9

74.5

35.4

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

48.4

-0.1

1.5

56.28

36.2

Associated Gene:

Gene:

MCCC1

Ensembl Gene ID:

ENSAPLG00000008989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009393

17593142 - 17609782

16641