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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17651497_17658938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17651497 - 17658938

Intron Length:

7442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAA

U12 Branch Point Sequence:

TGCTTTATAAGA

Flanking Amino Acid:

LQPTSTEKAQMEEDKGSVSS

Intron Amino Acid Position:

1240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

77.6

Major BPS

70.1

0.5

67.3

39.3

Major PPT

78.2

0.63

0.8

36.6

Minor 5ss

40.4

-1.1

3.3

55.8

48.3

Minor BPS

48.1

-0.1

1.9

59.92

40.4

Associated Gene:

Gene:

ATP11B

Ensembl Gene ID:

ENSAPLG00000009719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032601

17651374 - 17701759

50386