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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17672136_17672517_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17672136 - 17672517

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

AAATGTCTATTT

Flanking Amino Acid:

DEKALVEAASRVGVVFTGTS

Intron Amino Acid Position:

673

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.3

29.3

Major BPS

58.4

0.21

1.2

38.7

Major PPT

83.1

0.74

0.7

81.3

23.7

Minor 5ss

41.2

-1

45.5

Minor BPS

41.5

-0.5

2.1

56.87

39.9

Associated Gene:

Gene:

ATP11B

Ensembl Gene ID:

ENSAPLG00000009719

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035075

17654039 - 17701759

47721

ENSAPLT00000045892

17647934 - 17701759

53826

ENSAPLT00000032601

17651374 - 17701759

50386

ENSAPLT00000043680

17651374 - 17701759

50386

ENSAPLT00000010171

17644946 - 17701759

56814

ENSAPLT00000039878

17648675 - 17701759

53085

ENSAPLT00000036375

17644946 - 17701759

56814