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Intron Name: Anas_platyrhynchos_platyrhynchos_9_1776615_1779170_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1776615 - 1779170

Intron Length:
2556

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGTCTT

5'SS Class:
major

3'SS Sequence:
TTATATTTCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TTTTTTTTAACT

Flanking Amino Acid:
LVADKRLIRQNKPENWDVWY

Intron Amino Acid Position:
320

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
75.5
40.6

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
81.4
0.71
0.9
76.2
37.3

Minor 5ss
41.4
-1
3.1
55.9
42.3

Minor BPS
88.9
1.3
0.8
99.22
22

Associated Gene:

Gene:
DIPK2A

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1776412 - 1788013
11602