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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17770388_17795556_R

Intron Information:

Intron Rank:

133391

Intron Class:

major

Intron Phase:

Intron Coordinates:

17770388 - 17795556

Intron Length:

25169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATCCTGTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTGTATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.29

0.9

57.5

37.1

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

51.6

0.03

2.2

73.08

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036421

17769602 - 17795909

26308