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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17830791_17832122_F

Intron Information:

Intron Rank:

126656

Intron Class:

major

Intron Phase:

Intron Coordinates:

17830791 - 17832122

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCGAGTCTA

5'SS Class:

major

3'SS Sequence:

TATTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.5

0.25

1.4

63.8

40.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.2

0.88

0.7

81.5

35.8

Minor 5ss

24.2

-3

3.8

37.7

40.9

Minor BPS

59.9

0.29

1.9

78.2

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028278

17830731 - 17835650

4920