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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17832214_17835563_F

Intron Information:

Intron Rank:

126657

Intron Class:

major

Intron Phase:

Intron Coordinates:

17832214 - 17835563

Intron Length:

3350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTCTTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.7

0.65

0.7

72.8

25.5

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

66.8

0.61

1.8

88.14

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018269

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028278

17830731 - 17835650

4920