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Intron Name: Anas_platyrhynchos_platyrhynchos_9_17959988_18056999_R

Intron Information:

Intron Rank:

136286

Intron Class:

major

Intron Phase:

Intron Coordinates:

17959988 - 18056999

Intron Length:

97012

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTCCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GCTGATTGAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

79.4

0.66

0.7

77.3

24.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

48.2

-0.1

1.7

57.68

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047994

17887058 - 18058699

171642

ENSAPLT00000029478

17935207 - 18058699

123493