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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18057067_18058239_R

Intron Information:

Intron Rank:

136287

Intron Class:

major

Intron Phase:

Intron Coordinates:

18057067 - 18058239

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

ATTTTCTGACAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

77.2

0.61

0.9

72.7

36.6

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

50.7

1.8

66.67

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047994

17887058 - 18058699

171642

ENSAPLT00000029478

17935207 - 18058699

123493