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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18065184_18068454_F

Intron Information:

Intron Rank:

130379

Intron Class:

major

Intron Phase:

Intron Coordinates:

18065184 - 18068454

Intron Length:

3271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTGCATTGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.8

38.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

-0.8

2.9

56.9

47.4

Minor BPS

56.2

0.19

1.9

72.9

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023024

18064678 - 18069259

4582