Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_1821857_1828490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1821857 - 1828490

Intron Length:

6634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CTTTGTTTGATT

Flanking Amino Acid:

LHETGGAMVYGLVMGLLIRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

88.7

0.87

0.7

81.1

30.9

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

60.4

0.41

1.8

78.01

39.5

Associated Gene:

Gene:

SLC9A9

Ensembl Gene ID:

ENSAPLG00000000606

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045050

1821682 - 2036835

215154

ENSAPLT00000001069

1821682 - 2036835

215154