Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_18373939_18374908_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18373939 - 18374908

Intron Length:

970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGTGTGT

5'SS Class:

major

3'SS Sequence:

TCTGTTTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

AGTATCTTAAGT

Flanking Amino Acid:

PRGGKSSISSVLKDPDSNPY

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.2

0.29

1.1

55.9

43.6

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

77.3

0.61

0.9

76.9

37.3

Minor 5ss

37.3

-1.4

3.6

52.8

46.3

Minor BPS

61.8

0.45

1.7

75.62

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010528

18369841 - 18398115

28275

ENSAPLT00000041443

18369572 - 18398115

28544