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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18376882_18377602_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18376882 - 18377602

Intron Length:

721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATATGAAAT

Flanking Amino Acid:

LLEYHIAYLKEVEQLRLERL

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.6

90.6

20.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.1

0.68

0.8

30.5

Minor 5ss

36.3

-1.6

3.3

47.2

Minor BPS

0.11

1.8

76.36

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041443

18369572 - 18398115

28544

ENSAPLT00000010528

18369841 - 18398115

28275