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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18379166_18381340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18379166 - 18381340

Intron Length:

2175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATT

Flanking Amino Acid:

DTGTFRIYGETADAVKKARS

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010528

18369841 - 18398115

28275

ENSAPLT00000041443

18369572 - 18398115

28544