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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18382840_18383271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18382840 - 18383271

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

TTTATCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

AATATTTTAACG

Flanking Amino Acid:

TVDVPEDLRDACANENAHKD

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

63.1

43.4

Major BPS

89.7

0.98

0.7

89.9

Major PPT

83.3

0.75

0.8

81.5

30.4

Minor 5ss

31.6

-2.1

2.6

32.3

34.9

Minor BPS

63.8

0.29

1.4

63.32

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041443

18369572 - 18398115

28544

ENSAPLT00000010528

18369841 - 18398115

28275