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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18389071_18398064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18389071 - 18398064

Intron Length:

8994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGGCA

5'SS Class:

major

3'SS Sequence:

GTTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CTTCTTATAACA

Flanking Amino Acid:

VRGSNGAFYKGFIKDVHEDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.38

1.2

57.8

41.5

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

82.5

0.73

0.9

81.2

36.5

Minor 5ss

-1.8

3.7

47.9

47.7

Minor BPS

0.22

1.6

69.02

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010032

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010528

18369841 - 18398115

28275

ENSAPLT00000041443

18369572 - 18398115

28544