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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18453692_18454269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18453692 - 18454269

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTGG

5'SS Class:

major

3'SS Sequence:

GACTTTTAAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TGACTTTTAAAT

Flanking Amino Acid:

SAENKALEDELQKMQKEKMN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

63.4

43.8

Major BPS

69.5

0.48

73.5

28.6

Major PPT

62.5

0.28

58.9

40.8

Minor 5ss

-0.5

2.8

55.9

42.9

Minor BPS

60.3

0.4

1.4

72.2

38.1

Associated Gene:

Gene:

CCDC39

Ensembl Gene ID:

ENSAPLG00000010760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011221

18453443 - 18472494

19052