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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18465760_18466146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18465760 - 18466146

Intron Length:

387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGGTATTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GCTTTCTTATTT

Flanking Amino Acid:

ELKKAKAIKQEMMIEDNLLK

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

66.3

0.37

1.1

66.1

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

63.6

0.51

1.6

75.8

41.6

Associated Gene:

Gene:

CCDC39

Ensembl Gene ID:

ENSAPLG00000010760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011221

18453443 - 18472494

19052