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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18467718_18468362_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18467718 - 18468362

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

GCTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TCAGCTTTATTT

Flanking Amino Acid:

EKTQTYYVIKAAQEKEALQR

Intron Amino Acid Position:

720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

84.1

0.77

0.8

81.1

35.5

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

53.6

0.19

1.7

67.81

Associated Gene:

Gene:

CCDC39

Ensembl Gene ID:

ENSAPLG00000010760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011221

18453443 - 18472494

19052