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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18469551_18470818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18469551 - 18470818

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

AATGAATTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATTTTATAAATT

Flanking Amino Acid:

QIKELQENLQSMEKNLDILL

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

68.3

0.41

1.1

59.4

45.1

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

57.1

0.3

1.9

78.9

37.5

Associated Gene:

Gene:

CCDC39

Ensembl Gene ID:

ENSAPLG00000010760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011221

18453443 - 18472494

19052