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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18479799_18480377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18479799 - 18480377

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTTATGTACAT

Flanking Amino Acid:

ITSDDLPLHYKRSIEVANSA

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

75.1

0.57

79.2

33.2

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

45.4

-0.2

2.4

73.73

43.2

Associated Gene:

Gene:

TTC14

Ensembl Gene ID:

ENSAPLG00000010921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011403

18473916 - 18482010

8095