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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18481459_18481615_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18481459 - 18481615

Intron Length:
157

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGGGAC

5'SS Class:
major

3'SS Sequence:
TCCTGTGTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTACAG

U12 Branch Point Sequence:
CTCGGGTTACAG

Flanking Amino Acid:
PIAENIEEDDECYAVMPPLE

Intron Amino Acid Position:
97

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
65.3
34.3

Major BPS
46.4
-0.2
1.6
60.7
45.9

Major PPT
77.9
0.63
0.9
71.9
38

Minor 5ss
24.2
-3
3.3
28.4
38

Minor BPS
33.3
-1.4
2.4
35.06
46.2

Associated Gene:

Gene:
TTC14

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18473916 - 18482010
8095