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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18538373_18549808_R

Intron Information:

Intron Rank:

138644

Intron Class:

major

Intron Phase:

Intron Coordinates:

18538373 - 18549808

Intron Length:

11436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAAG

5'SS Class:

major

3'SS Sequence:

TTGTCTCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TGCTTATAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

63.1

42.9

Major BPS

78.6

0.71

78.6

Major PPT

80.9

0.69

0.8

73.3

37.1

Minor 5ss

29.9

-2.3

3.3

38.8

46.5

Minor BPS

48.2

-0.1

1.9

59.33

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033969

18527702 - 18549913

22212

ENSAPLT00000028441

18504466 - 18549913

45448