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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18679872_18680604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18679872 - 18680604

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

TCTTTCCTACAG

Flanking Amino Acid:

GISCINLGAYREAVSNFLTA

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

70.4

0.51

67.1

39.4

Major PPT

89.1

0.88

0.6

84.2

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

46.4

-0.4

2.1

56.57

44.8

Associated Gene:

Gene:

PEX5L

Ensembl Gene ID:

ENSAPLG00000011193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011650

18643390 - 18680809

37420