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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18702546_18703839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18702546 - 18703839

Intron Length:

1294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATATTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGATCATTAAAG

Flanking Amino Acid:

FFLHLINLVERNPVGSENPS

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

84.4

0.85

34.5

Major PPT

81.6

0.71

0.8

78.4

35.2

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

58.7

0.13

1.8

64.3

42.5

Associated Gene:

Gene:

USP13

Ensembl Gene ID:

ENSAPLG00000011239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025940

18691121 - 18728397

37277

ENSAPLT00000017575

18691121 - 18728397

37277

ENSAPLT00000011758

18692252 - 18728397

36146