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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18703966_18707197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18703966 - 18707197

Intron Length:

3232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CATTTATTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCTTCTTCAAAA

Flanking Amino Acid:

ELGKIIFFVQPQHNGISPRM

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

1.1

82.6

29.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

78.4

0.64

0.8

70.3

Minor 5ss

32.6

-2

3.1

41.2

45.2

Minor BPS

0.4

1.6

72.74

39.3

Associated Gene:

Gene:

USP13

Ensembl Gene ID:

ENSAPLG00000011239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011758

18692252 - 18728397

36146