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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18716310_18724078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18716310 - 18724078

Intron Length:

7769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATTGTGA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

AATCTCCTAACA

Flanking Amino Acid:

PKRRNAKLFLDLETNSDLNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

61.2

39.9

Major BPS

0.55

71.8

31.4

Major PPT

1.1

0.4

13.8

Minor 5ss

42.3

-0.9

3.1

56.3

47.9

Minor BPS

58.8

0.27

1.7

69.4

35.9

Associated Gene:

Gene:

USP13

Ensembl Gene ID:

ENSAPLG00000011239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025940

18691121 - 18728397

37277

ENSAPLT00000017575

18691121 - 18728397

37277

ENSAPLT00000011758

18692252 - 18728397

36146