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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18724140_18728298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18724140 - 18728298

Intron Length:

4159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCATTTTTAATT

Flanking Amino Acid:

YLHLKRHVREKVPGASGGAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.8

0.94

0.6

84.7

30.2

Minor 5ss

32.5

-2

3.3

47.4

Minor BPS

66.9

0.61

1.2

72.55

39.1

Associated Gene:

Gene:

USP13

Ensembl Gene ID:

ENSAPLG00000011239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025940

18691121 - 18728397

37277

ENSAPLT00000017575

18691121 - 18728397

37277