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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18728487_18732733_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18728487 - 18732733

Intron Length:

4247

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAGCAGA

5'SS Class:

major

3'SS Sequence:

CCATCAGTTGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACAAGAA

U12 Branch Point Sequence:

CCCCCCATCAGT

Flanking Amino Acid:

EGTEQDSKDSFLHTTLSRNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.4

60.9

43.7

Major BPS

44.8

-0.3

Major PPT

57.5

0.17

1.1

56.1

37.9

Minor 5ss

30.6

-2.2

3.9

45.2

43.7

Minor BPS

41.2

-0.6

2.2

53.49

47.6

Associated Gene:

Gene:

MRPL47

Ensembl Gene ID:

ENSAPLG00000011793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035516

18728391 - 18735684

7294