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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18735677_18736225_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

18735677 - 18736225

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCCAGTAAT

5'SS Class:

major

3'SS Sequence:

AGGCTGCTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGTAA

U12 Branch Point Sequence:

CTGTTAGTAAGT

Flanking Amino Acid:

KFPHLAVNSQRTLSLV*

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.3

69.3

41.3

Major BPS

50.6

0.02

1.4

52.1

43.5

Major PPT

47.9

-0.1

1.2

41.5

42.8

Minor 5ss

23.8

-3

3.6

30.7

Minor BPS

43.4

-0.4

2.4

63.76

46.8

Associated Gene:

Gene:

MRPL47

Ensembl Gene ID:

ENSAPLG00000011793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012278

18728184 - 18736245

8062