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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18744139_18744314_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18744139 - 18744314

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CTTATCTCCATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TAATTCTTATCT

Flanking Amino Acid:

TRSWHNYMCNCVIQDFQASV

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.4

36.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

74.3

0.55

0.8

69.1

31.4

Minor 5ss

36.9

-1.5

49.2

40.2

Minor BPS

68.9

0.67

1.6

81.85

39.3

Associated Gene:

Gene:

ACTL6A

Ensembl Gene ID:

ENSAPLG00000011809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012348

18740956 - 18748080

7125