Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_18744951_18745624_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

18744951 - 18745624

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TCTTTATGGCTAG|T

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATC

Flanking Amino Acid:

FFLCKTAVLTAFANGRSTGL

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

47.8

-0.1

1.4

53.2

46.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

66.6

0.38

1.1

62.3

43.4

Minor 5ss

93.1

1.45

0.9

85.5

31.8

Minor BPS

87.5

1.16

0.8

90.01

23.7

Associated Gene:

Gene:

ACTL6A

Ensembl Gene ID:

ENSAPLG00000011809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012348

18740956 - 18748080

7125