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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18747819_18748003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18747819 - 18748003

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTTTCATACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

100

1.24

0.5

100

Major PPT

0.74

0.9

77.1

37.1

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

60.2

0.4

1.9

82.93

38.1

Associated Gene:

Gene:

ACTL6A

Ensembl Gene ID:

ENSAPLG00000011809

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012348

18740956 - 18748080

7125