Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_9_18817652_18818116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18817652 - 18818116

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAATAAA

5'SS Class:

major

3'SS Sequence:

TGTTCTATTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TTTCACTTACGG

Flanking Amino Acid:

DRFTKHFLQKRKYKV*

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

70.3

35.6

Major BPS

77.7

0.69

30.2

Major PPT

0.5

1.1

72.6

36.6

Minor 5ss

35.7

-1.6

2.8

38.2

40.9

Minor BPS

48.1

-0.2

2.1

61.76

45.7

Associated Gene:

Gene:

MFN1

Ensembl Gene ID:

ENSAPLG00000012500

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013096

18817635 - 18839346

21712