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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18821324_18821835_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18821324 - 18821835

Intron Length:
512

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTGAGTGTT

5'SS Class:
major

3'SS Sequence:
TCCACTCTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TGCTTTTTATTC

Flanking Amino Acid:
LLGLADPNLPIPRPLATTPS

Intron Amino Acid Position:
556

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.6
0.58
1
75.4
34.4

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
73.8
0.54
0.8
65.4
36

Minor 5ss
35.4
-1.7
3.5
54.7
43.6

Minor BPS
54.6
0.12
1.5
61.73
38.7

Associated Gene:

Gene:
MFN1

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18817635 - 18839346
21712