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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18829463_18829565_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18829463 - 18829565

Intron Length:
103

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTATGTAGG

5'SS Class:
major

3'SS Sequence:
TTTTGTTTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTAAGAT

U12 Branch Point Sequence:
TTTTGTTTCACA

Flanking Amino Acid:
RQKAQGMPEGGGALAEGFQT

Intron Amino Acid Position:
304

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1
67.1
43.8

Major BPS
67.4
0.43
1.1
63.4
42.8

Major PPT
88
0.86
0.7
83.5
31.6

Minor 5ss
41.4
-1
2.5
47.9
43

Minor BPS
59.4
0.29
2.2
78.6
38.6

Associated Gene:

Gene:
MFN1

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18817635 - 18839346
21712