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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18830219_18832962_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
18830219 - 18832962

Intron Length:
2744

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGGCGT

5'SS Class:
major

3'SS Sequence:
TTTTAATTCTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TGTGTTTTAATT

Flanking Amino Acid:
ANSESTLMNTEKHFFHKVNE

Intron Amino Acid Position:
217

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
57.3
46.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.6
0.67
0.8
78.2
34.8

Minor 5ss
39
-1.2
3.4
56.4
47.8

Minor BPS
68.4
0.66
1.3
79.54
37.3

Associated Gene:

Gene:
MFN1

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18817635 - 18839346
21712