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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18845665_18846256_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18845665 - 18846256

Intron Length:
592

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGTCTA

5'SS Class:
strong_major

3'SS Sequence:
ATTTTTAATCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTATTTTTAATC

Flanking Amino Acid:
RKTLHPSRYSDSSGATKYID

Intron Amino Acid Position:
20

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.3
0.74
1.2
78
38.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
75.1
0.57
0.9
68.3
41.9

Minor 5ss
33.2
-1.9
2.9
41.7
44.7

Minor BPS
75.9
0.79
1
78.34
30.9

Associated Gene:

Gene:
ZNF639

Ensembl Gene ID:

Chromosome:
9

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18843140 - 18846314
3175