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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18864445_18868417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18864445 - 18868417

Intron Length:

3973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

TGTCTCTCTACA

Flanking Amino Acid:

IGVTGSNPNKSNRIARDNEL

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

0.6

1.2

75.9

36.3

Major PPT

82.9

0.74

0.8

76.7

32.1

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

49.7

-0

1.9

65.87

39.8

Associated Gene:

Gene:

PIK3CA

Ensembl Gene ID:

ENSAPLG00000012924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013522

18857279 - 18878583

21305