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Intron Name: Anas_platyrhynchos_platyrhynchos_9_18899862_18901410_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18899862 - 18901410

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCTGCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTGTGTTTCACA

Flanking Amino Acid:

PPQVVSLPAQMGSSKPGGRV

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

67.7

0.4

61.5

40.1

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

52.4

0.07

2.2

70.38

42.6

Associated Gene:

Gene:

ZMAT3

Ensembl Gene ID:

ENSAPLG00000013292

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021193

18896145 - 18903827

7683

ENSAPLT00000013836

18898312 - 18905972

7661